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Covalent Peptides and Proteins for Therapeutics: Revolutionizing Drug Development by FM Paulussen·2023·Cited by 54—This review summarizes examples ofcovalentinhibitors that employ peptidic binders and have been tested in a biological context.

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Peptide- and protein-based therapeutics by FM Paulussen·2023·Cited by 54—This review summarizes examples ofcovalentinhibitors that employ peptidic binders and have been tested in a biological context.

The field of peptide therapeutics and protein therapeutics is undergoing a significant transformation with the advent of covalent drug design. Historically, covalent drugs were primarily the domain of small molecules. However, recent advancements have unlocked the immense potential of forming permanent chemical bonds between therapeutic peptides and proteins and their biological targets. This approach offers distinct advantages, leading to enhanced potency, selectivity, and in vivo efficacy, paving the way for more effective treatments for a wide range of diseases.

The fundamental principle behind covalent peptides and proteins for therapeutics lies in their ability to form an irreversible bond with their target protein. This contrasts with traditional non-covalent interactions, which are reversible and can lead to a less sustained therapeutic effect. The formation of a covalent bond ensures a prolonged interaction with the target, often resulting in a more robust and durable response. This characteristic is particularly valuable in situations where sustained target engagement is crucial for therapeutic success.

One of the primary benefits of employing covalent strategies in drug development is the potential to overcome resistance mechanisms. By irreversibly binding to their targets, covalent inhibitors targeting specific proteins can be less susceptible to efflux pumps or target mutations that can diminish the effectiveness of non-covalent drugs. This is especially relevant in areas like oncology, where drug resistance is a major clinical challenge.

Furthermore, covalent drug design can lead to improved pharmacokinetic and pharmacodynamic profiles. The irreversible binding can translate to lower required doses and less frequent administration, improving patient compliance and reducing the overall drug burden. The enhanced biochemical efficiency and potency of covalent drugs, compared to their non-covalent counterparts, allow for more precise targeting and a reduced likelihood of off-target effects, contributing to a more favorable safety profile.

The development of covalent peptides and proteins involves sophisticated chemistry and a deep understanding of molecular interactions. Peptides have been produced and modified using both chemical and biological methods, alongside novel design and delivery strategies. This includes the incorporation of specific "warheads" – reactive chemical groups – onto peptide or protein scaffolds. These warheads are designed to selectively react with nucleophilic amino acid residues, such as cysteine or lysine, on the target protein. This targeted approach ensures that the covalent modification occurs precisely at the desired site, minimizing unwanted side reactions.

The screening and identification of these covalent interactions are crucial. In the screening stage of covalent drugs, peptides are analyzed by HRMS (High-Resolution Mass Spectrometry) to identify which amino acid sites covalently bind to the protein. This analytical technique provides high precision and sensitivity, enabling researchers to pinpoint the exact location of the covalent modification.

The versatility of covalent peptide and protein engineering is expanding rapidly. Researchers are exploring various formats, including peptide macrocycles, which offer enhanced metabolic stability and the potential to engage with challenging biological targets. The ability to rationally design covalent peptide-based inhibitors allows for precise control over reactivity and selectivity, leading to highly targeted therapies.

The development of therapeutic proteins and peptides is a rapidly growing field, with covalent strategies emerging as a powerful tool to enhance their therapeutic potential. While challenges in formulation and stabilization of peptides and proteins still exist, the inherent advantages of covalent interactions are driving innovation. The ability to form stable, irreversible bonds with target proteins means that covalent peptides and proteins for therapeutics have the potential to benefit from the same advantages that covalent small molecules have over their non-covalent counterparts, but with the added benefits of the inherent biological activity and specificity of peptides and proteins.

In conclusion, covalent peptides and proteins for therapeutics represent a significant advancement in drug discovery and development. By harnessing the power of permanent chemical bonds, researchers are creating a new generation of highly potent, selective, and effective therapies that can overcome existing limitations and address unmet medical needs across a spectrum of diseases. The continued exploration of novel covalent chemistries and design strategies promises to further revolutionize the landscape of peptide and protein-based medicines.

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by VY Berdan·2021·Cited by 63—Drugs with a covalent mechanism of action benefit fromenhanced potency, selectivity, and in vivo efficacy.
by SB Ebrahimi·2023·Cited by 395—This review chronicles both well-established and emerging design strategies that have enabled this paradigm shift by transformingprotein-based structures.
by L Wang·2022·Cited by 2316—Small moleculecovalentdrugs have many advantages compared with noncovalent drugs, such as increased biochemical efficiency and potency, 

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